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  1. covid-drdb-payload covid-drdb-payload Public

    Forked from hivdb/covid-drdb-payload

    A relational database of SARS-CoV-2 resistance data.

  2. flu-seqneut-2025to2026 flu-seqneut-2025to2026 Public

    Forked from jbloomlab/flu-seqneut-2025to2026

    Near real-time data on the human neutralizing antibody landscape to influenza virus as of early 2026 to inform vaccine-strain selection

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  3. seqneut-pipeline seqneut-pipeline Public

    Forked from jbloomlab/seqneut-pipeline

    Pipeline for analyzing sequencing-based neutralization assays

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  4. nextstrain-prot-titers-tree nextstrain-prot-titers-tree Public

    Forked from jbloomlab/nextstrain-prot-titers-tree

    Build interactive `nextstrain` trees on protein sequences designed to display neutralization titer values

    Python

  5. dms_variants dms_variants Public

    Forked from jbloomlab/dms_variants

    Analyze deep mutational scanning of barcoded variants.

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  6. neutcurve neutcurve Public

    Forked from jbloomlab/neutcurve

    Fit and plot neutralization curves

    Jupyter Notebook